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Systems Biology of Symbiosis (SymBioSys) Database @ The Medina Lab
The Santos Lab is happy to host a link to the Systems Biology of Symbiosis (SymBioSys) Database. This product, based on work from the Medina Lab at the University of California Merced and maintained by Shinichi Sunagawa, provides a web-accessible database interface to express sequence tags (ESTs) from various cnidarian species and Symbiodinium isolates. If you have any questions regarding the SymBioSys Database, please feel free to email Shinichi Sunagawa or Monica Medina.
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As of Oct 2009, the species and # unique EST sequences in the SymBioSys Database are:
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Symbiodinium sp. strain KB8 (clade A):
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1,220
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Symbiodinium sp. "type" C3:
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2,632
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the anemone Aiptasia pallida:
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4,925
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the scleractinian Acropora millepora (larval transcriptome):
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99,091
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the scleractinian Acropora palmata:
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14,647
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the scleractinian Montastraea annularis:
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2,388
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the scleractinian Montastraea faveolata:
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11,611
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the scleractinian Porites astreoides:
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6,681
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