Auburn University   Biological Sciences

The Santos Lab

Homepage

Research

People

Publications

Journal Covers

Classes

Opportunities

Photo Gallery

 

Protocols

 

PCR Primers

 

Datasets

 

Search Databases

Symbiodinium Cultures

SD2-GED

SymBioSys

SYM Pub Search

 

Bookmarks

 

SYM DGGE Images

 

CNID-SYM Listserve

 

A-PONDS Listserve

 

Blogs

 

Software & Scripts

 

Login 2 Lab Server

 

Web Applications

SYM-BLAST

HALO-BLAST

EMBOSS

FaBox

WebLogo

PRIMACLADE

Primers4Clades

CODEHOP

CGView Server

In silico PCR

Calculate Oligo Tm

Microsat Finder

Get Protein Info

Basic Data Stats

>>IBDWS

MRBAYES WEB FORM

PAUP* WEB FORM

BIOMAIL

 
   

 

 

Isolation by Distance Web Service (IBDWS)

The Isolation by Distance Web Service (IBDWS) (Jensen et al. 2005, BMC Genetics 6:13) is a robust and fast web-based application for analyzing (genetic) isolation by (geographic) distance. As stated in the abstract: "The population genetic pattern known as "isolation by distance" results from spatially limited gene flow and is a commonly observed phenomenon in natural populations. However, few software programs exist for estimating the degree of isolation by distance among populations, and they tend not to be user-friendly. We have created Isolation by Distance Web Service (IBDWS) a user-friendly web interface for determining patterns of isolation by distance. Using this site, population geneticists can perform a variety of powerful statistical tests including Mantel tests, Reduced Major Axis (RMA) regression analysis, as well as calculate FST between all pairs of populations and perform basic summary statistics (e.g., heterozygosity). All statistical results, including publication-quality scatter plots in Postscript format, are returned rapidly to the user and can be easily downloaded." Documentation on how to use the program can be found at its site.

 
 
>> Go to IBDWS web page.

Back to faculty and staff