Rashotte Lab

    Research

 

 

The lab is focused on understanding how the plant hormone cytokinin is involved in regulating plant growth and development.

To do this we are examining the group of genes known as CRFs or Cytokinin Response Factors in both Arabidopsis and tomato. CRF are transcription factors that are named after the AP2/ERF or Ethylene Response Factor family of which they are members.

We are taking similar approaches (molecular, genetic, and phenotype analyses at the whole plant, tissue and cellular level) in both Arabidopsis and tomato to understand the role of CRF in cytokinin based growth and development as well as in abiotic stress responses.


CRFs in Arabidopsis
 
In Arabidopsis we have made full use of the tools available in this genetic model system to study CRFs. Mutants, transcript and gemonic analyses, bioassays, and protein movement studies have generated the baseline of information on CRFs. We are continuing to build on these results to gain a better understanding of how and where CRFs function in plant development and abiotic stress responses.


CRFs in Tomato (SlCRFs)
In tomato we identified and initially characterized all the SlCRFs in this species. This work has established basic tissue expression patterns throughout the plant and hormanal response of SlCRFs to cytokinin and auxin. Recent work is focused on SlCRF response to abiotic stress as well as generally determining their functional roles. Connections between Arabidopsis and tomato functional orthologs are beging explored using similar approaches as noted above for Arabidopsis studies.


CRF Phylogeny and Clade alignment figures from Zwack et al., 2012

This work has been supported by funding from USDA and AAES-HATCH grants.